treespace : Statistical exploration of landscapes of phylogenetic trees

Author:

Jombart Thibaut1ORCID,Kendall Michelle2,Almagro-Garcia Jacob3,Colijn Caroline2

Affiliation:

1. Department of Infectious Disease Epidemiology; MRC Centre for Outbreak Analysis and Modelling; School of Public Health; Imperial College London; London UK

2. Department of Mathematics; Imperial College London; London UK

3. Wellcome Trust Centre for Human Genetics; University of Oxford; Oxford UK

Funder

Medical Research Council Centre for Outbreak Analysis and Modelling

National Institute for Health Research-Health Protection Research Unit for Modelling Methodology

Engineering and Physical Sciences Research Council

Publisher

Wiley

Subject

Genetics,Ecology, Evolution, Behavior and Systematics,Biotechnology

Reference75 articles.

1. Amenta , N. Klingner , J 2002 Case study: Visualizing sets of evolutionary trees

2. Survey of branch support methods demonstrates accuracy, power, and robustness of fast likelihood-based approximation schemes;Anisimova;Systematic Biology,2011

3. A principal component analysis for trees;Aydin;The Annals of Applied Statistics,2009

4. Geometry of the space of phylogenetic trees;Billera;Advances in Applied Mathematics,2001

5. Fast unfolding of communities in large networks;Blondel;Journal of Statistical Mechanics,2008

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