A comprehensive and comparative evaluation of primers for metabarcoding eDNA from fish-Reference-Cited by-同舟云学术

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A comprehensive and comparative evaluation of primers for metabarcoding eDNA from fish

Published:2020-09-26 Issue:12 Volume:11 Page:1609-1625
ISSN:2041-210X
Container-title:Methods in Ecology and Evolution
language:en
Short-container-title:Methods Ecol. Evol.

Author:

Zhang Shan¹²^ORCID,Zhao Jindong¹²³,Yao Meng¹²^ORCID

Affiliation:

1. School of Life Sciences Peking University Beijing China

2. Institute of Ecology College of Urban and Environmental Sciences Peking University Beijing China

3. State Key Laboratory of Freshwater Ecology and Biotechnology Institute of Hydrobiology Chinese Academy of Sciences Wuhan China

Publisher

Wiley

Subject

Ecological Modeling,Ecology, Evolution, Behavior and Systematics

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1111/2041-210X.13485

Reference70 articles.

1. Scrutinizing key steps for reliable metabarcoding of environmental samples

2. Environmental DNA reveals tropical shark diversity in contrasting levels of anthropogenic impact

3. Residual eDNA detection sensitivity assessed by quantitative real-time PCR in a river ecosystem

4. Environmental DNA detection of rare and invasive fish species in two Great Lakes tributaries

5. ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases

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1. Authentication of seafood species on the ASFIS list (FAO) by in-silico evaluation of primers for metabarcoding;Food Control;2024-11

2. Autonomous samplers and environmental DNA metabarcoding: sampling day and primer choice have greatest impact on fish detection probabilities;Metabarcoding and Metagenomics;2024-09-13

3. Comparing diversity and structure of freshwater fish assemblages using environmental DNA and gillnetting methods: A case study of a large deep reservoir in East China;Ecological Indicators;2024-09

4. Human activities strengthen the influence of deterministic processes in the mechanisms of fish community assembly in tropical rivers of Yunnan, China;Journal of Environmental Management;2024-09

5. Fish community monitoring in floodplain lakes: eDNA metabarcoding and traditional sampling revealed inconsistent fish community composition;Ecological Indicators;2024-09

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