Non‐invasive candidate protein signature predicts hepatic venous pressure gradient reduction in cirrhotic patients after sustained virologic response

Author:

Richards Shola M.1ORCID,Guo Fang2ORCID,Zou Heng2,Nigsch Florian1ORCID,Baiges Anna345,Pachori Alok2,Zhang Yiming2,Lens Sabela45ORCID,Pitts Rebecca6ORCID,Finkel Nancy6,Loureiro Joseph6ORCID,Mongeon Dale6,Ma Shenglin6,Watkins Mollie6,Polus Florine1ORCID,Albillos Agustin47,Tellez Luis47,Martinez‐González Javier47ORCID,Bañares Rafael48ORCID,Turon Fanny345,Ferrusquía‐Acosta José3ORCID,Perez‐Campuzano Valeria345,Magaz Marta345,Forns Xavier45ORCID,Badman Michael6,Sailer Andreas W.1ORCID,Ukomadu Chinweike6ORCID,Hernández‐Gea Virginia345,Garcia‐Pagán Juan Carlos345ORCID

Affiliation:

1. Novartis Institutes of Biomedical Research Basel Switzerland

2. Novartis Institutes for Biomedical Research East Hannover New Jersey USA

3. Barcelona Hepatic Hemodynamic Laboratory Barcelona Health Care Provider of the European Reference Network on Rare Liver Barcelona Spain

4. CIBEREHD (Centro de Investigación Biomédica en Red Enfermedades Hepáticas y Digestivas) Barcelona Spain

5. Liver Unit, Hospital Clínic, Institut de Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS) Departament de Medicina. Facultat de Medicina i Ciències de la Salut. Universitat de Barcelona. Barcelona Spain

6. Novartis Institutes for Biomedical Research Cambridge Massachusetts USA

7. Servicio de Gastroenterología y Hepatología, Hospital Universitario Ramón y Cajal, Universidad de Alcalá Instituto Ramón y Cajal de Investigación Sanitaria (IRYCIS) Madrid Spain

8. Hospital General Universitario Gregorio Marañón, Facultad de Medicina Universidad Complutense Madrid Spain

Abstract

AbstractBackground and AimsA reduction in hepatic venous pressure gradient (HVPG) is the most accurate marker for assessing the severity of portal hypertension and the effectiveness of intervention treatments. This study aimed to evaluate the prognostic potential of blood‐based proteomic biomarkers in predicting HVPG response amongst cirrhotic patients with portal hypertension due to Hepatitis C virus (HCV) and had achieved sustained virologic response (SVR).MethodsThe study comprised 59 patients from two cohorts. Patients underwent paired HVPG (pretreatment and after SVR), liver stiffness (LSM), and enhanced liver fibrosis scores (ELF) measurements, as well as proteomics‐based profiling on serum samples using SomaScan® at baseline (BL) and after SVR (EOS). Machine learning with feature selection (Caret, Random Forest and RPART) methods were performed to determine the proteins capable of classifying HVPG responders. Model performance was evaluated using AUROC (pROC R package).ResultsPatients were stratified by a change in HVPG (EOS vs. BL) into responders (greater than 20% decline in HVPG from BL, or <10 mmHg at EOS with >10 mmHg at BL) and non‐responders. LSM and ELF decreased markedly after SVR but did not correlate with HVPG response. SomaScan (SomaLogic, Inc., Boulder, CO) analysis revealed a substantial shift in the peripheral proteome composition, reflected by 82 significantly differentially abundant proteins. Twelve proteins accurately distinguished responders from non‐responders, with an AUROC of .86, sensitivity of 83%, specificity of 83%, accuracy of 83%, PPV of 83%, and NPV of 83%.ConclusionsA combined non‐invasive soluble protein signature was identified, capable of accurately predicting HVPG response in HCV liver cirrhosis patients after achieving SVR.

Funder

Novartis Institutes for BioMedical Research

Publisher

Wiley

Subject

Hepatology

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