Novel LSS variants in alopecia and intellectual disability syndrome: New case report and clinical spectrum of LSS‐related rare disease traits

Author:

Elbendary Hasnaa M.1ORCID,Marafi Dana23ORCID,Saad Ahmed K.34ORCID,Elhossini Rasha1,Duan Ruizhi3,Rafat Karima1,Jhangiani Shalini N.5,Gibbs Richard A.35,Pehlivan Davut367ORCID,Calame Daniel G.367ORCID,Posey Jennifer E.3ORCID,Lupski James R.3568ORCID,Zaki Maha S.1ORCID

Affiliation:

1. Department of Clinical Genetics Human Genetics and Genome Research Institute, National Research Centre Cairo Egypt

2. Department of Pediatrics, Faculty of Medicine Kuwait University Safat Kuwait

3. Department of Molecular and Human Genetics Baylor College of Medicine Houston Texas USA

4. Department of Medical Molecular Genetics Human Genetics and Genome Research Institute, National Research Centre Cairo Egypt

5. Human Genome Sequencing Center Baylor College of Medicine Houston Texas USA

6. Texas Children's Hospital Houston Texas USA

7. Section of Pediatric Neurology and Developmental Neuroscience, Department of Pediatrics Baylor College of Medicine Houston Texas USA

8. Department of Pediatrics Baylor College of Medicine Houston Texas USA

Abstract

AbstractPathogenic biallelic variants in LSS are associated with three Mendelian rare disease traits including congenital cataract type 44, autosomal recessive hypotrichosis type 14, and alopecia‐intellectual disability syndrome type 4 (APMR4). We performed trio research exome sequencing on a family with a four‐year‐old male with global developmental delay, epilepsy and striking alopecia, and identified novel compound heterozygous LSS splice site (c.14+2T>C) and missense (c.1357 G>A; p.V453L) variant alleles. Rare features associated with APMR4 such as cryptorchidism, micropenis, mild cortical brain atrophy and thin corpus callosum were detected. Previously unreported APMR4 findings including cerebellar involvement in the form of unsteady ataxic gait, small vermis with prominent folia, were noted. A review of all reported variants to date in 29 families with LSS‐related phenotypes showed an emerging genotype–phenotype correlation. Our report potentially expands LSS‐related phenotypic spectrum and highlights the importance of performing brain imaging in LSS‐related conditions.

Funder

Spastic Paraplegia Foundation

National Human Genome Research Institute

National Institute of Neurological Disorders and Stroke

Science and Technology Development Fund

Publisher

Wiley

Subject

Genetics (clinical),Genetics

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