Counting with DNA in metabarcoding studies: How should we convert sequence reads to dietary data?-Reference-Cited by-同舟云学术

Counting with DNA in metabarcoding studies: How should we convert sequence reads to dietary data?

Published:2018-06-17 Issue:2 Volume:28 Page:391-406
ISSN:0962-1083
Container-title:Molecular Ecology
language:en
Short-container-title:Mol Ecol

Author:

Deagle Bruce E.¹^ORCID,Thomas Austen C.²,McInnes Julie C.¹^ORCID,Clarke Laurence J.¹³^ORCID,Vesterinen Eero J.⁴⁵^ORCID,Clare Elizabeth L.⁶^ORCID,Kartzinel Tyler R.⁷,Eveson J. Paige⁸

Affiliation:

1. Australian Antarctic Division Channel Highway Kingston TAS Australia

2. Science Department Smith‐Root Inc. Vancouver Washington

3. Antarctic Climate & Ecosystems Cooperative Research Centre University of Tasmania Hobart TAS Australia

4. Biodiversity Unit and Department of Biology University of Turku Turku Finland

5. Department of Agricultural Sciences University of Helsinki Helsinki Finland

6. School of Biological and Chemical Sciences Queen Mary University of London London UK

7. Department of Ecology and Evolutionary Biology Brown University Providence Rhode Island

8. CSIRO Oceans and Atmosphere Hobart TAS Australia

Publisher

Wiley

Subject

Genetics,Ecology, Evolution, Behavior and Systematics

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1111/mec.14734

Reference85 articles.

1. Agriculture shapes the trophic niche of a bat preying on multiple pest arthropods across Europe: Evidence from DNA metabarcoding

2. Scrutinizing key steps for reliable metabarcoding of environmental samples

3. Quantifying microbial communities with 454 pyrosequencing: does read abundance count?

4. Diet analysis by next‐generation sequencing indicates the frequent consumption of introduced plants by the critically endangered red‐headed wood pigeon ( C olumba janthina nitens ) in oceanic island habitats

5. CopyRighter: a rapid tool for improving the accuracy of microbial community profiles through lineage-specific gene copy number correction

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