Testing molecular date estimates using an ecological and vicariant case study in treefrogs: The Geological‐Ecological Molecular Calibration

Author:

Jowers Michael J.123ORCID,Pajares Jesús Muñoz1ORCID,Weber John4ORCID,Arkle Jeanette5ORCID,Arenas‐Castro Salvador6ORCID,Ho Simon Y. W.7ORCID,Rivas Gilson A.8ORCID,Murphy John C.9ORCID,Borzée Amaël10ORCID,Pyron R. Alexander11ORCID,Perez‐Losada Marcos12ORCID,De Freitas Mayke13,Downie J. Roger14,Moreno‐Rueda Gregorio315ORCID,Forcina Giovanni16ORCID,Sánchez‐Ramírez Santiago17

Affiliation:

1. CIBIO/InBIO (Centro de Investigação Em Biodiversidade e Recursos Genéticos) Universidade do Porto, Campus Agrario De Vairão Vairão Portugal

2. BIOPOLIS Program in Genomics, Biodiversity and Land Planning CIBIO, Campus de Vairão Vairão Portugal

3. Departamento de Zoología, Facultad de Ciencias Universidad de Granada Granada Spain

4. Department of Geology Grand Valley State University Allendale Michigan USA

5. Augustana College, Swenson Hall Geosciences Rock Island Illinois USA

6. Área de Ecología, Departamento de Botánica, Ecología y Fisiología Vegetal, Facultad de Ciencias Universidad de Córdoba, Campus de Rabanales Córdoba Spain

7. School of Life and Environmental Sciences University of Sydney Sydney New South Wales Australia

8. Museo de Biología, Facultad Experimental de Ciencias Universidad del Zulia Maracaibo Estado Zulia Venezuela

9. Science and Education Field Museum Chicago Illinois USA

10. Laboratory of Animal Behaviour and Conservation, College of Life Sciences Nanjing Forestry University Nanjing People's Republic of China

11. Department of Biological Sciences, Columbian College of Arts and Sciences The George Washington University Washington District of Columbia USA

12. Department of Biostatistics and Bioinformatics, Milken Institute School of Public Health The George Washington University Washington District of Columbia USA

13. University of Cambridge Cambridge UK

14. School of Life Sciences University of Glasgow Glasgow UK

15. Department of Biological Sciences Dartmouth College Hanover New Hampshire USA

16. Global Change Ecology and Evolution Research Group (GloCEE), and Research Team on Soil Biology and Subterranean Ecosystems (GIBSES), Departamento de Ciencias de la Vida Universidad de Alcalá (UAH) Alcalá de Henares Spain

17. Department of Ecology and Evolutionary Biology University of Toronto Toronto Ontario Canada

Abstract

AbstractAimTo date a vicariant event through the mutualistic relationship of a hylid frog and its bromeliad host found across two isolated mountain ranges as part of an island–continental split and to use this information to calibrate a molecular dating analysis of hylids.LocationSouth America.Time PeriodPliocene.Major Taxa StudiedTreefrogs, Arboranae.MethodsPliocene tectonic movements sank a portion of a mountain range that connected present‐day Trinidad (island) and northern Venezuela, eventually isolating populations of the golden tree frog Phytotriades auratus and its host bromeliad Glomeropitcairnia erectiflora on both sides of a saltwater barrier. We estimated the submersion rate timing of the vicariant event, then employed ecological niche modelling to establish the distribution of the frog and its host to the Pliocene. We generated nucleotide sequence data for the hylid on each side of the marine barrier and proposed a biogeographic calibration for the split between populations. Using Bayesian phylogenetic analysis, we evaluated the impact of incorporating this biogeographic calibration on estimates of treefrog divergence times.ResultsA relatively continuous, high‐elevation mountain range existed before the Pliocene and the opening of the Gulf of Paria (4.45 ± 0.85 Ma). Phytotriades auratus and G. erectiflora would have been distributed across the Paria and Northern Range mountains as a single population since the Pliocene. Divergence times among treefrogs (Arboranae) were older than those inferred using fossil calibrations alone, with mean age estimates for subfamilies and genera being ~2 and ~1.2 million years older, respectively.Main ConclusionsOur study presents a biogeographic calibration based on a vicariant model that connects the evolution of the populations of a hylid through geology and ecological data. The implementation of this date as a molecular clock calibration reduces the uncertainty in date estimates for the shallower nodes in the phylogeny of Arboranae.

Funder

Ministarstvo znanosti i obrazovanja

National Science Foundation

Publisher

Wiley

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