Identification and validation of novel Blastocystis subtype ST41 in a Colombian patient undergoing colorectal cancer screening

Author:

Hernández‐Castro Carolina12ORCID,Maloney Jenny G.3ORCID,Agudelo‐López Sonia P.2ORCID,Toro‐Londoño Miguel A.2ORCID,Botero‐Garcés Jorge H.2ORCID,Orozco María C.2,Quintero‐Quinchia Yulieth C.2,Correa‐Cote Juan C.4ORCID,Múnera‐Duque Alejandro4ORCID,Ricaurte‐Ciro Juan C.4ORCID,Londoño‐Álvarez Luis I.4,Escobar René M.4,Köster Pamela C.1ORCID,Sánchez Sergio5ORCID,Carmena David16ORCID,Santín Mónica3ORCID

Affiliation:

1. Parasitology Reference and Research Laboratory Spanish National Centre for Microbiology, Health Institute Carlos III Madrid Spain

2. Parasitology Group, Faculty of Medicine, Academic Corporation for the Study of Tropical Pathologies University of Antioquia Medellín Colombia

3. Environmental Microbial and Food Safety Laboratory, Agricultural Research Service United States Department of Agriculture Beltsville Maryland USA

4. Clínica Medellín Grupo Quironsalud Medellín Colombia

5. Food and Waterborne Bacterial Infections Reference and Research Laboratory, National Centre for Microbiology Health Institute Carlos III Madrid Spain

6. Center for Biomedical Research Network (CIBER) in Infectious Diseases Health Institute Carlos III Madrid Spain

Abstract

AbstractBlastocystis sp. is among the most frequent intestinal protists identified in humans globally. However, characterization of Blastocystis subtype diversity in humans is ongoing. We report here the identification of novel Blastocystis subtype ST41 in a Colombian patient undergoing colorectal cancer screening involving colonoscopy and fecal testing (microscopy, culture, PCR). The full‐length ssu rRNA gene sequence of the protist was generated using MinION long‐read sequencing technology. The validity of the novel subtype was confirmed via phylogenetic and pairwise distance analyses of the full‐length ST41 sequence and all other valid subtypes. The study provides reference material essential for conducting subsequent experimental studies.

Funder

Instituto de Salud Carlos III

Publisher

Wiley

Subject

Microbiology

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