Early‐stage predictors of deterioration among 3145 nonsevere SARS‐CoV‐2‐infected people community‐isolated in Wuhan, China: A combination of machine learning algorithms and competing risk survival analyses

Author:

Min Kaiyuan1ORCID,Cheng Zhenshun23,Liu Jiangfeng1,Fang Yanhong23,Wang Weichen4,Yang Yehong1,Geldsetzer Pascal56,Bärnighausen Till57,Yang Juntao1,Liu Depei1,Chen Simiao57,Wang Chen789

Affiliation:

1. State Key Laboratory of Medical Molecular Biology Institute of Basic Medical Sciences Chinese Academy of Medical Sciences School of Basic Medicine Peking Union Medical College Beijing China

2. Department of Respiratory Medicine Zhongnan Hospital of Wuhan University Wuhan China

3. Wuhan Research Center for Infectious Diseases and Cancer Chinese Academy of Medical Sciences Wuhan China

4. Innovation and Information Management Faculty of Business and Economics The University of Hong Kong Hong Kong China

5. Heidelberg Institute of Global Health (HIGH) Faculty of Medicine and University Hospital Heidelberg University Heidelberg Germany

6. Division of Primary Care and Population Health Department of Medicine Stanford University Stanford California United States

7. Chinese Academy of Medical Sciences and Peking Union Medical College Beijing China

8. National Clinical Research Center for Respiratory Diseases Beijing China

9. Department of Pulmonary and Critical Care Medicine Center of Respiratory Medicine China‐Japan Friendship Hospital Beijing China

Abstract

AbstractObjectiveTo determine which early‐stage variables best predicted the deterioration of coronavirus disease 2019 (COVID‐19) among community‐isolated people infected with severe acute respiratory syndrome coronavirus 2 and to test the performance of prediction using only inexpensive‐to‐measure variables.MethodsMedical records of 3145 people isolated in two Fangcang shelter hospitals (large‐scale community isolation centers) from February to March 2020 were accessed. Two complementary methods—machine learning algorithms and competing risk survival analyses—were used to test potential predictors, including age, gender, severity upon admission, symptoms (general symptoms, respiratory symptoms, and gastrointestinal symptoms), computed tomography (CT) signs, and comorbid chronic diseases. All variables were measured upon (or shortly after) admission. The outcome was deterioration versus recovery of COVID‐19.ResultsMore than a quarter of the 3145 people did not present any symptoms, while one‐third ended isolation due to deterioration. Machine learning models identified moderate severity upon admission, old age, and CT ground‐glass opacity as the most important predictors of deterioration. Removing CT signs did not degrade the performance of models. Competing risk models identified age ≥ 35 years, male gender, moderate severity upon admission, cough, expectoration, CT patchy opacity, CT consolidation, comorbid diabetes, and comorbid cardiovascular or cerebrovascular diseases as significant predictors of deterioration, while a stuffy or runny nose as a predictor of recovery.ConclusionsEarly‐stage prediction of COVID‐19 deterioration can be made with inexpensive‐to‐measure variables, such as demographic characteristics, severity upon admission, observable symptoms, and self‐reported comorbid diseases, among asymptomatic people and mildly to moderately symptomatic patients.

Publisher

Wiley

Subject

Health Policy,General Medicine

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