The phenotypic and genotypic spectrum of individuals with mono‐ or biallelic ANK3 variants

Author:

Furia Francesca12,Levy Amanda M.3,Theunis Miel4,Bamshad Michael J.567,Bartos Meghan N.8,Bijlsma Emilia K.9,Brancati Francesco1011,Cejudo Lucile12,Chong Jessica X.56ORCID,De Luca Chiara10,Dean Sarah Joy8,Egense Alena13,Goel Himanshu1415,Guenzel Adam J.16,Hüffmeier Ulrike17,Legius Eric4,Mancini Grazia M. S.1819,Marcos‐Alcalde Iñigo20,Niclass Tanguy12,Planes Marc21,Redon Sylvia2223,Ros‐Pardo David20ORCID,Rouault Karen2223,Schot Rachel1824,Schuhmann Sarah17,Shen Joseph J.13,Tao Alice M.25,Thiffault Isabelle2627,Van Esch Hilde428,Wentzensen Ingrid M.16,Barakat Tahsin Stefan181924ORCID,Møller Rikke S.12,Gomez‐Puertas Paulino20,Chung Wendy K.2930,Gardella Elena1231,Tümer Zeynep332ORCID

Affiliation:

1. Department of Epilepsy Genetics and Personalized Treatment The Danish Epilepsy Centre Dianalund Denmark

2. Faculty of Health Science University of Southern Denmark (SDU) Odense Denmark

3. Department of Clinical Genetics Kennedy Center, Copenhagen University Hospital Copenhagen Denmark

4. Center for Human Genetics University Hospitals Leuven Leuven Belgium

5. Department of Pediatrics, Division of Genetic Medicine University of Washington Seattle Washington USA

6. Brotman‐Baty Institute for Precision Medicine University of Washington Seattle Washington USA

7. Department of Pediatrics, Division of Genetic Medicine Seattle Children's Hospital Seattle Washington USA

8. Department of Genetics The University of Alabama at Birmingham Birmingham Alabama USA

9. Department of Clinical Genetics Leiden University Medical Centre Leiden The Netherlands

10. Human Genetics, Department of Life, Health and Environmental Sciences University of L'Aquila L'Aquila Italy

11. Human Functional Genetics Laboratory Istituto di Ricovero e Cura a Carattere Scientifico San Raffaele Roma Rome Italy

12. CHU de Poitiers Service de Génétique Poitiers France

13. Division of Genomic Medicine, Department of Pediatrics University of California Davis Sacramento California USA

14. General Genetics Service Hunter Genetics Waratah New South Wales Australia

15. School of Medicine and Public Health College of Health, Medicine and Wellbeing, University of Newcastle Callaghan New South Wales Australia

16. GeneDx Inc. Gaithersburg Maryland USA

17. Institute of Human Genetics Universitätsklinikum Erlangen, FAU Erlangen‐Nürnberg Erlangen Germany

18. Department of Clinical Genetics Erasmus MC University Medical Center Rotterdam The Netherlands

19. ENCORE Expertise Center for Neurodevelopmental Disorders Erasmus MC University Medical Center Rotterdam The Netherlands

20. Molecular Modeling Group Centro de Biología Molecular Severo Ochoa (CBM, CSIC‐UAM) Madrid Spain

21. Service de Génétique Clinique CHRU de Brest Brest France

22. Service de Génétique Médicale et Biologie de la Reproduction CHU de Brest Brest France

23. Université de Brest INSERM, Etablissement Français du Sang, UMR 1078 Brest France

24. Discovery Unit, Department of Clinical Genetics Erasmus MC University Medical Center Rotterdam The Netherlands

25. Vagelos School of Physicians and Surgeons Columbia University New York New York USA

26. Department of Pathology Children's Mercy Kansas City Kansas City Missouri USA

27. Genomic Medicine Center Children's Mercy Kansas City Kansas City Missouri USA

28. Laboratory for the Genetics of Cognition KU Leuven Leuven Belgium

29. Department of Pediatrics Boston Children's Hospital Boston Massachusetts USA

30. Department of Pediatrics Harvard Medical School Boston Massachusetts USA

31. Department of Neurophysiology The Danish Epilepsy Centre Dianalund Denmark

32. Department of Clinical Medicine, Faculty of Health and Medical Sciences University of Copenhagen Copenhagen Denmark

Abstract

AbstractANK3 encodes ankyrin‐G, a protein involved in neuronal development and signaling. Alternative splicing gives rise to three ankyrin‐G isoforms comprising different domains with distinct expression patterns. Mono‐ or biallelic ANK3 variants are associated with non‐specific syndromic intellectual disability in 14 individuals (seven with monoallelic and seven with biallelic variants). In this study, we describe the clinical features of 13 additional individuals and review the data on a total of 27 individuals (16 individuals with monoallelic and 11 with biallelic ANK3 variants) and demonstrate that the phenotype for biallelic variants is more severe. The phenotypic features include language delay (92%), autism spectrum disorder (76%), intellectual disability (78%), hypotonia (65%), motor delay (68%), attention deficit disorder (ADD) or attention deficit hyperactivity disorder (ADHD) (57%), sleep disturbances (50%), aggressivity/self‐injury (37.5%), and epilepsy (35%). A notable phenotypic difference was presence of ataxia in three individuals with biallelic variants, but in none of the individuals with monoallelic variants. While the majority of the monoallelic variants are predicted to result in a truncated protein, biallelic variants are almost exclusively missense. Moreover, mono‐ and biallelic variants appear to be localized differently across the three different ankyrin‐G isoforms, suggesting isoform‐specific pathological mechanisms.

Funder

National Human Genome Research Institute

Nederlandse Organisatie voor Wetenschappelijk Onderzoek

Ministero della Salute

Publisher

Wiley

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