Evaluation of V2 18S rDNA barcode marker and assessment of sample collection and DNA extraction methods for metabarcoding of autotrophic euglenids

Author:

Gumińska Natalia1ORCID,Łukomska‐Kowalczyk Maja1ORCID,Chaber Katarzyna1ORCID,Zakryś Bożena1ORCID,Milanowski Rafał1ORCID

Affiliation:

1. Institute of Evolutionary Biology, Faculty of Biology Biological and Chemical Research Centre, University of Warsaw, ul. Żwirki i Wigury 101, PL‐02‐089 Warsaw Poland

Funder

Narodowe Centrum Nauki

Publisher

Wiley

Subject

Ecology, Evolution, Behavior and Systematics,Microbiology

Reference59 articles.

1. Andrews S. (2010)FastQC: a quality control tool for high throughput sequence data. URLhttp://www.bioinformatics.babraham.ac.uk/projects/fastqc/.

2. Accuracy, limitations and cost efficiency of eDNA-based community survey in tropical frogs

3. Spatial and temporal dynamics of a freshwater eukaryotic plankton community revealed via 18S rRNA gene metabarcoding

4. The effects of spatial and temporal replicate sampling on eDNA metabarcoding;Beentjes K.K.;PeerJ Life Environ,2019

5. Phylogeny and Classification of Euglenophyceae: A Brief Review

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