Comparative and transcriptional analysis of the predicted secretome in the lignocellulose-degrading basidiomycete fungusPleurotus ostreatus-Reference-Cited by-同舟云学术

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Comparative and transcriptional analysis of the predicted secretome in the lignocellulose-degrading basidiomycete fungusPleurotus ostreatus

Published:2016-06-08 Issue:12 Volume:18 Page:4710-4726
ISSN:1462-2912
Container-title:Environmental Microbiology
language:en
Short-container-title:Environmental Microbiology

Author:

Alfaro Manuel¹,Castanera Raúl¹,Lavín José L.¹²,Grigoriev Igor V.³,Oguiza José A.¹,Ramírez Lucía¹,Pisabarro Antonio G.¹

Affiliation:

1. Department of Agrarian Production; Genetics and Microbiology Research Group, Public University of Navarre; Pamplona 31006 Spain

2. Genome Analysis Platform, CIC bioGUNE & CIBERehd, Bizkaia Technology Park; Derio 48160 Spain

3. US Department of Energy Joint Genome Institute; Walnut Creek CA 94598 USA

Publisher

Wiley

Subject

Ecology, Evolution, Behavior and Systematics,Microbiology

Link

http://onlinelibrary.wiley.com/wol1/doi/10.1111/1462-2920.13360/fullpdf

Reference75 articles.

1. Comparative analysis of secretomes in basidiomycete fungi;Alfaro;J. Proteomics,2014

2. HTSeq - A Python framework to work with high-throughput sequencing data;Anders;Bioinformatics,2014

3. OmniMapFree: a unified tool to visualise and explore sequenced genomes;Antoniw;BMC Bioinformatics,2011

4. InterPro-an integrated documentation resource for protein families, domains and functional sites;Apweiler;Bioinformatics,2000

5. Cerato-platanin shows expansin-like activity on cellulosic materials;Baccelli;Appl Microbiol Biotechnol,2014

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2. Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus;International Journal of Molecular Sciences;2023-11-27

3. A bioinformatic workflow for in silico secretome prediction with the lignocellulose degrading ascomycete fungus Parascedosporium putredinis NO1;Molecular Microbiology;2023-08-30

4. Transcriptome Metabolic Characterization of Tuber borchii SP1—A New Spanish Strain for In Vitro Studies of the Bianchetto Truffle;International Journal of Molecular Sciences;2023-07-01

5. Experimental evidence that lignin‐modifying enzymes are essential for degrading plant cell wall lignin by Pleurotus ostreatus using CRISPR/Cas9;Environmental Microbiology;2023-05-22

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