The E phylogroup of Escherichia coli is highly diverse and mimics the whole E. coli species population structure-Reference-Cited by-同舟云学术

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The E phylogroup of Escherichia coli is highly diverse and mimics the whole E. coli species population structure

Published:2021-09-09 Issue:11 Volume:23 Page:7139-7151
ISSN:1462-2912
Container-title:Environmental Microbiology
language:en
Short-container-title:Environ Microbiol

Author:

Clermont Olivier¹,Condamine Bénédicte¹,Dion Sara¹,Gordon David M.²^ORCID,Denamur Erick¹³^ORCID

Affiliation:

1. Université de Paris, IAME UMR 1137, INSERM Paris F‐75018 France

2. Division of Ecology and Evolution Research School of Biology, Australian National University Canberra ACT Australia

3. AP‐HP, Laboratoire de Génétique Moléculaire Hôpital Bichat‐Claude Bernard Paris F‐75018 France

Funder

Fondation pour la Recherche Médicale

Publisher

Wiley

Subject

Ecology, Evolution, Behavior and Systematics,Microbiology

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1111/1462-2920.15742

Reference71 articles.

1. Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups

2. Large-scale genome analysis of bovine commensal Escherichia coli reveals that bovine-adapted E. coli lineages are serving as evolutionary sources of the emergence of human intestinal pathogenic strains

3. SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

4. ClermonTyping: an easy-to-use and accurate in silico method for Escherichia genus strain phylotyping

5. Evidence for Coexistence of Distinct Escherichia coli Populations in Various Aquatic Environments and Their Survival in Estuary Water

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