Cryptic genetic structure and copy‐number variation in the ubiquitous forest symbiotic fungus Cenococcum geophilum-Reference-Cited by-同舟云学术

Cryptic genetic structure and copy‐number variation in the ubiquitous forest symbiotic fungus Cenococcum geophilum

Published:2021-09-15 Issue:11 Volume:23 Page:6536-6556
ISSN:1462-2912
Container-title:Environmental Microbiology
language:en
Short-container-title:Environ Microbiol

Author:

Dauphin Benjamin¹^ORCID,Freitas Pereira Maíra¹²^ORCID,Kohler Annegret²^ORCID,Grigoriev Igor V.³⁴^ORCID,Barry Kerrie⁴^ORCID,Na Hyunsoo⁴,Amirebrahimi Mojgan⁴,Lipzen Anna⁴,Martin Francis²^ORCID,Peter Martina¹^ORCID,Croll Daniel⁵^ORCID

Affiliation:

1. Swiss Federal Research Institute WSL Birmensdorf Switzerland

2. INRAE, UMR 1136 INRAE‐University of Lorraine, Interactions Arbres/Microorganismes, Laboratory of Excellence ARBRE, INRAE‐Grand Est Champenoux France

3. Department of Plant and Microbial Biology University of California Berkeley USA

4. U.S. Department of Energy Joint Genome Institute Lawrence Berkeley National Laboratory Berkeley USA

5. Laboratory of Evolutionary Genetics Institute of Biology, University of Neuchâtel Neuchâtel Switzerland

Funder

Agence Nationale de la Recherche

Publisher

Wiley

Subject

Ecology, Evolution, Behavior and Systematics,Microbiology

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1111/1462-2920.15752

Reference100 articles.

1. Andrews S.(2017)FastQC: a quality control tool for high throughput sequence data.

2. From FastQ data to high‐confidence variant calls: the genome analysis toolkit best practices pipeline;Van der Auwera G.A.;Curr Protoc Bioinformatics,2013

3. SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

4. Fungal heavy metal adaptation through single nucleotide polymorphisms and copy‐number variation

5. Cochliobolus Phylogenetics and the Origin of Known, Highly Virulent Pathogens, Inferred from ITS and Glyceraldehyde-3-Phosphate Dehydrogenase Gene Sequences

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