Comprehensive single‐PCR 16S and 18S rRNA community analysis validated with mock communities, and estimation of sequencing bias against 18S-Reference-Cited by-同舟云学术

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Comprehensive single‐PCR 16S and 18S rRNA community analysis validated with mock communities, and estimation of sequencing bias against 18S

Published:2021-05-12 Issue:6 Volume:23 Page:3240-3250
ISSN:1462-2912
Container-title:Environmental Microbiology
language:en
Short-container-title:Environ Microbiol

Author:

Yeh Yi‐Chun¹^ORCID,McNichol Jesse¹^ORCID,Needham David M.¹,Fichot Erin B.¹,Berdjeb Lyria¹,Fuhrman Jed A.¹

Affiliation:

1. Department of Biological Sciences University of Southern California CA Los Angeles 90089‐0371 USA

Funder

Division of Ocean Sciences

Gordon and Betty Moore Foundation

Simons Foundation

Publisher

Wiley

Subject

Ecology, Evolution, Behavior and Systematics,Microbiology

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1111/1462-2920.15553

Reference40 articles.

1. A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes

2. Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns

3. Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton

4. Protist diversity along a salinity gradient in a coastal lagoon

5. The distribution of phytoplankton in the Baltic Sea assessed by a prokaryotic 16S rRNA gene primer system

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