Enrichment of native plastic‐associated biofilm communities to enhance polyester degrading activity

Author:

Howard Sophie A.1,Carr Clodagh M.23,Sbahtu Habteab Isaack1,Onwukwe Uchechukwu4,López Maria J.5,Dobson Alan D. W.23,McCarthy Ronan R.1ORCID

Affiliation:

1. Centre for Inflammation Research and Translational Medicine, Division of Biosciences, Department of Life Sciences, College of Health and Life Sciences Brunel University London Uxbridge UK

2. School of Microbiology University College Cork Cork Ireland

3. SSPC‐SFI Research Centre for Pharmaceuticals University College Cork Cork Ireland

4. Experimental Techniques Centre, College of Engineering, Design and Physical Sciences Brunel University London Uxbridge UK

5. Department of Biology and Geology, CITE II‐B University of Almería, Agrifood Campus of International Excellence ceiA3, CIAIMBITAL Almeria Spain

Abstract

AbstractPlastic pollution is an increasing worldwide problem urgently requiring a solution. While recycling rates are increasing globally, only 9% of all plastic waste has been recycled, and with the cost and limited downstream uses of recycled plastic, an alternative is needed. Here, we found that expanded polystyrene (EPS) promoted high levels of bacterial biofilm formation and sought out environmental EPS waste to characterize these native communities. We demonstrated that the EPS attached communities had limited plastic degrading activity. We then performed a long‐term enrichment experiment where we placed a robust selection pressure on these communities by limiting carbon availability such that the waste plastic was the only carbon source. Seven of the resulting enriched bacterial communities had increased plastic degrading activity compared to the starting bacterial communities. Pseudomonas stutzeri was predominantly identified in six of the seven enriched communities as the strongest polyester degrader. Sequencing of one isolate of P. stutzeri revealed two putative polyesterases and one putative MHETase. This indicates that waste plastic‐associated biofilms are a source for bacteria that have plastic‐degrading potential, and that this potential can be unlocked through selective pressure and further in vitro enrichment experiments, resulting in biodegradative communities that are better than nature.

Funder

Academy of Medical Sciences

European Commission

Natural Environment Research Council

Publisher

Wiley

Subject

Ecology, Evolution, Behavior and Systematics,Microbiology

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