Estimation of metagenome size and structure in an experimental soil microbiota from low coverage next-generation sequence data-Reference-Cited by-同舟云学术

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Estimation of metagenome size and structure in an experimental soil microbiota from low coverage next-generation sequence data

Published:2012-11-01 Issue:1 Volume:114 Page:141-151
ISSN:1364-5072
Container-title:Journal of Applied Microbiology
language:en
Short-container-title:J Appl Microbiol

Author:

Frisli T.¹²,Haverkamp T.H.A.²³,Jakobsen K.S.²³,Stenseth N.Chr.²,Rudi K.¹⁴

Affiliation:

1. Faculty of Education and Science; Hedmark University College; Hamar Norway

2. Centre for Evolutionary and Ecological Synthesis (CEES); Department of Biology; University of Oslo; Blindern; Oslo Norway

3. Microbial Evolution Research Group, MERG; Department of Biology; University of Oslo; Blindern; Oslo Norway

4. Department of Chemistry; Biotechnology and Food Science; Norwegian Universíty of Lìfe Sciences; Ås Norway

Funder

Hedmark University College and Hedmark Sparebank

Publisher

Wiley

Subject

Applied Microbiology and Biotechnology,General Medicine,Biotechnology

Link

http://onlinelibrary.wiley.com/wol1/doi/10.1111/jam.12035/fullpdf

Reference32 articles.

1. Phylogenetic identification and in situ detection of individual microbial cells without cultivation;Amann;Microbiol Rev,1995

2. The complete genome sequence of Escherichia coli K-12;Blattner;Science (New York NY),1997

3. Prokaryotic diversity and its limits: microbial community structure in nature and implications for microbial ecology;Curtis;Curr Opin Microbiol,2004

4. Computational improvements reveal great bacterial diversity and high metal toxicity in soil;Gans;Science (New York, NY),2005

5. Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons;Haas;Genome Res,2011

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