Phylogenetic and phylodynamic analysis of a classical swine fever virus outbreak in Japan (2018

Phylogenetic and phylodynamic analysis of a classical swine fever virus outbreak in Japan (2018–2020)

Published:2021-05-05 Issue: Volume: Page:
ISSN:1865-1674
Container-title:Transboundary and Emerging Diseases
language:en
Short-container-title:Transbounding Emerging Dis

Author:

Sawai Kotaro¹^ORCID,Nishi Tatsuya²,Fukai Katsuhiko²^ORCID,Kato Tomoko²,Hayama Yoko¹^ORCID,Yamamoto Takehisa¹^ORCID

Affiliation:

1. Epidemiology Unit Viral Disease and Epidemiology Research Division National Institute of Animal HealthNational Agriculture and Food Research Organization Tsukuba Japan

2. Exotic Disease Research Station Division of Transboundary Animal Diseases National Institute of Animal HealthNational Agriculture and Food Research Organization Kodaira Japan

Funder

Ministry of Agriculture, Forestry and Fisheries

Publisher

Wiley

Subject

General Veterinary,General Immunology and Microbiology,General Medicine

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1111/tbed.14117

Reference46 articles.

1. BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics

2. Reconstructing the evolutionary history of pandemic foot-and-mouth disease viruses: the impact of recombination within the emerging O/ME-SA/Ind-2001 lineage

3. Improving the Accuracy of Demographic and Molecular Clock Model Comparison While Accommodating Phylogenetic Uncertainty