Patterns of genome size variation in caridean shrimps: new estimates for non-gambarelloides Synalpheus species

Author:

Moraes Isabela R.R.1ORCID,Pardo Luis Miguel23,Araya-Jaime Cristian45ORCID,Wolf Milena Regina1,Yasui George Shigueki6,Solano-Iguaran Jaiber J.78ORCID,Romagnoli Graziela Gorete9,Alevi Kaio Cesar Chaboli10,Castilho Antonio Leão1

Affiliation:

1. Universidade Estadual Paulista “Júlio de Mesquita Filho” (UNESP), LABIAQUA—Laboratório de Biologia de Invertebrados Aquáticos, Programa de Pós-Graduação em Ciências Biológicas (Zoologia), Instituto de Biociências de Botucatu, Rua Prof. Dr. Antônio Celso Wagner Zanin, 250, Distrito de Rubião Júnior, Botucatu 18618-689, SP, Brasil

2. Instituto de Ciencias Marinas y Limnológicas, Facultad de Ciencias, Universidad Austral de Chile, 5090000, Valdivia, Chile

3. Centro de Investigación Dinámica de Ecosistemas Marinos de Altas Latitudes (IDEAL), Valdivia–Punta Arenas, Chile, 5090000

4. Departamento de Biología, Universidad de La  Serena, La Serena, 1720256, Chile

5. Instituto de Investigación Multidisciplinar en Ciencia y Tecnología, 1720256, Universidad de La Serena, La Serena, Chile

6. Department of Animal Reproduction—FMVZ, University of Sao Paulo, Avenida Prof. Dr. Orlando Marques de Paiva, 87, São Paulo 05508-270, SP, Brasil

7. Departamento de Salud Hidrobiológica, División de Investigación en Acuicultura, Instituto de Fomento Pesquero, 2361827, Puerto Montt, Chile

8. Instituto de Ciencias Ambientales y Evolutivas, Facultad de Ciencias, Universidad Austral de Chile, Casilla 567, Valdivia 5090000, Chile

9. Department of Health Sciences, Oeste Paulista University—UNOESTE, Avenida Toto Pacheco, 2945, Zona Industrial, Jaú 17213-700, SP, Brasil

10. Laboratório de Parasitologia, Departamento de Ciências Biológicas, Faculdade de Ciências Farmacêuticas, Universidade Estadual Paulista “Júlio de Mesquita Filho”, FCFAR/UNESP, Rodovia Araraquara-Jaú km 1, Araraquara 14801-902, SP, Brasil

Abstract

Genome size (GS) or DNA nuclear content is considered a useful index for making inferences about evolutionary models and life history in animals, including taxonomic, biogeographical, and ecological scenarios. However, patterns of GS variation and their causes in crustaceans are still poorly understood. This study aimed to describe the GS of five Neotropical Synalpheus non-gambarelloides shrimps ( S. apioceros, S. minus, S. brevicarpus, S. fritzmueller, and S. scaphoceris) and compare the C-values of all Caridea infraorder in terms of geography and phylogenetics. All animals were sampled in the coast of São Paulo State, Brazil, and GS was assessed by flow cytometry analysis (FCA). The C-values ranged from 7.89 pg in S. apioceros to 12.24 pg in S. scaphoceris. Caridean shrimps had higher GS than other Decapoda crustaceans. The results reveal a tendency of obtaining larger genomes in species with direct development in Synalpheus shrimps. In addition, a tendency of positive biogeographical (latitudinal) correlation with Caridea infraorder was also observed. This study provides remarkable and new protocol for FCA (using gating strategy for the analysis), which led to the discovery of new information regarding GS of caridean shrimps, especially for Neotropical Synalpheus, which represents the second-largest group in the Caridea infraorder.

Publisher

Canadian Science Publishing

Subject

Genetics,Molecular Biology,General Medicine,Biotechnology

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