N-Methylamino Acids in Peptide Synthesis. III. Racemization during Deprotection by Saponification and Acidolysis

Abstract

The racemization of N-methylamino-acid derivatives in aqueous sodium hydroxide and hydrogen bromide in anhydrous acetic acid and other solvents has been investigated by determining the products of the reaction with an amino-acid analyzer after deprotection. Whereas MeIle-OMe, Z-MeIle, and the N-unmethylated derivatives were only slightly racemized ( <2%), Z-MeIle-OMe (18–24%), Z-Ala-MeLeu-OMe (22%), and Z-Ala-MeLeu-OBu′ (7%) were appreciably racemized by aqueous sodium hydroxide. It is suggested that these derivatives racemize because of the absence of an > N—H or carboxyl group whose ionization would suppress ionization of the neighboring α-C—H bond. Z-Melle and Z-Ala-MeLeu were substantially racemized (68% in 4 h and 34% in 1 h, respectively) by 5.6 N hydrogen bromide in acetic acid. The extent of racemization by acid varied with acid strength, polarity of solvent, and time. Incorporation of label into both isomers of Ala-MeLeu from a solution of the tritiated reagent established that ionization at the α-C—H bond had occurred. No racemization was caused by aqueous acid or by hydrogen chloride.