Simple and quick detection of extended-spectrum <i>β</i>-lactamase and carbapenemase-encoding genes using isothermal nucleic acid amplification techniques

Author:

NAKAYAMA TATSUYA1,SOGA KEISUKE2

Affiliation:

1. Graduate School of Integrated Sciences for Life, Hiroshima University

2. Division of Biochemistry, National Institute of Health Sciences

Publisher

The Society for Antibacterial and Antifungal Agents, Japan

Reference42 articles.

1. Anjum, M. F., Lemma, F., Cork, D. J., Meunier, D., Murphy, N., North, S. E., Woodford, N., Haines, J., and Randall, L. P. (2013) Isolation and detection of extended spectrum β-lactamase (ESBL)-producing Enterobacteriaceae from meat using chromogenic agars and isothermal loop-mediated amplification (LAMP) assays. J. Food Sci., 78, M1892-8.

2. Ayfan, A. K. S., Macdonald, J., Harris, P. N. A., Heney, C., Paterson, D. L., Trembizki, E., Wang, C. Y. T., Whiley, D. M., Zowawi, H. M., and Irwin, A. D. (2021) Rapid detection of NDM and VIM carbapenemase encoding genes by recombinase polymerase amplification and lateral flow-based detection. Eur. J. Clin. Microbiol. Infect. Dis., 40, 2447-2453.

3. Bordin, A., Trembizki, E., Windsor, M., Wee, R., Tan, L. Y., Buckley, C., Syrmis, M., Bergh, H., Cottrell, K., Zowawi, H. M., Sidjabat, H. E., Harris, P. N. A., Nimmo, G. R., Paterson, D. L., and Whiley, D. M. (2019) Evaluation of the SpeeDx Carba (beta) multiplex real-time PCR assay for detection of NDM, KPC, OXA-48-like, IMP-4-like and VIM carbapenemase genes. BMC Infect Dis., 19, 571.

4. Chen, N., Li, G., Si, Y., Zhang, W., Ye, Y., Wang, Y., Wang, K., Zong, M., and Fan, L. (2022) Evaluation of LAMP assay using phenotypic tests and PCR for detection of blaKPC gene among clinical samples. J. Clin. Lab. Anal., 36, e24310.

5. Clinical and Laboratory Standards Institute (CLSI) (2012) Performance standards for antimicrobial susceptibility testing: twenty-second informational supplement. 32, 169-170.

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