Signal strength and integrated intensity in confocal and image scanning microscopy

Author:

Sheppard Colin J. R.1ORCID,Castello Marco1,Tortarolo Giorgio12ORCID,Zunino Alessandro1,Slenders Eli1,Bianchini Paolo1ORCID,Vicidomini Giuseppe1ORCID,Diaspro Alberto13ORCID

Affiliation:

1. Istituto Italiano di Tecnologia

2. Laboratory of Experimental Biophysics

3. University of Genoa

Abstract

The properties of signal strength and integrated intensity in a scanned imaging system are reviewed. These properties are especially applied to confocal imaging systems, including image scanning microscopy. The integrated intensity, equal to the image of a uniform planar (sheet) object, rather than the peak of the point spread function, is a measure of the flux in an image. Analytic expressions are presented for the intensity in the detector plane for a uniform volume object, and for the resulting background. The variation in the integrated intensity with defocus for an offset point detector is presented. This axial fingerprint is independent of any pixel reassignment. The intensity in the detector plane is shown to contain the defocus information, and simple processing of the recorded data can improve optical sectioning and background rejection.

Publisher

Optica Publishing Group

Subject

Computer Vision and Pattern Recognition,Atomic and Molecular Physics, and Optics,Electronic, Optical and Magnetic Materials

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