Whole genome sequencing (WGS) fails to detect antimicrobial resistance (AMR) from heteroresistant subpopulation of Salmonella enterica-Reference-Cited by-同舟云学术

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Whole genome sequencing (WGS) fails to detect antimicrobial resistance (AMR) from heteroresistant subpopulation of Salmonella enterica

Published:2020-10 Issue: Volume:91 Page:103530
ISSN:0740-0020
Container-title:Food Microbiology
language:en
Short-container-title:Food Microbiology

Author:

Zwe Ye Htut,Chin Seow Fong,Kohli Gurjeet Singh,Aung Kyaw Thu^ORCID,Yang Liang,Yuk Hyun-Gyun

Funder

National University of Singapore

Nanyang Technological University

Ministry of Education

National Environment Agency

Korea National University of Transportation

Publisher

Elsevier BV

Subject

Microbiology,Food Science

Reference44 articles.

1. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing;Bankevich;J. Comput. Biol.,2012

2. The selective advantage of synonymous codon usage bias in Salmonella;Brandis;PLoS Genet.,2016

3. A functional classification scheme for beta-lactamases and its correlation with molecular structure;Bush;Antimicrob. Agents Chemother.,1995

4. Changing Italian nosocomial-community trends and heteroresistance in Staphylococcus aureus from bacteremia and endocarditis;Campanile;Eur. J. Clin. Microbiol. Infect. Dis.,2012

5. Rapid and precise alignment of raw reads against redundant databases with KMA;Clausen;BMC Bioinf.,2018

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