ESA: An efficient sequence alignment algorithm for biological database search on Sunway TaihuLight-Reference-Cited by-同舟云学术

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ESA: An efficient sequence alignment algorithm for biological database search on Sunway TaihuLight

Published:2023-09 Issue: Volume:117 Page:103043
ISSN:0167-8191
Container-title:Parallel Computing
language:en
Short-container-title:Parallel Computing

Author:

Zhang Hao^ORCID,Huang Zhiyi,Chen Yawen,Liang Jianguo,Gao Xiran

Funder

Shandong Province Department of Science and Technology

Natural Science Foundation of Shandong Province

Publisher

Elsevier BV

Subject

Artificial Intelligence,Computer Graphics and Computer-Aided Design,Computer Networks and Communications,Hardware and Architecture,Theoretical Computer Science,Software

Reference56 articles.

1. Sequence alignment and penalty choice: Review of concepts, case studies and implications;Vingron;J. Mol. Biol.,1994

2. Analyzing COVID-19 virus based on enhanced fragmented biological local aligner using improved ions motion optimization algorithm;Issa;Appl. Soft Comput.,2020

3. Bioinformatics;Baxevanis,2020

4. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs;Altschul;Nucl. Acids Res.,1997

5. [5] Rapid and sensitive sequence comparison with FASTP and FASTA;Pearson,1990

Cited by 2 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. A Set of Resource Scheduling Methods Based on New Sunway Many-core Processor;Proceedings of the 2024 8th International Conference on High Performance Compilation, Computing and Communications;2024-06-07

2. PSALR: Parallel Sequence Alignment for long Sequence Read with Hash model;2024-02-07

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