Automated simulation-based membrane protein refinement into cryo-EM data-Reference-Cited by-同舟云学术

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Automated simulation-based membrane protein refinement into cryo-EM data

Published:2023-07 Issue:13 Volume:122 Page:2773-2781
ISSN:0006-3495
Container-title:Biophysical Journal
language:en
Short-container-title:Biophysical Journal

Author:

Yvonnesdotter Linnea^ORCID,Rovšnik Urška,Blau Christian^ORCID,Lycksell Marie^ORCID,Howard Rebecca Joy^ORCID,Lindahl Erik^ORCID

Publisher

Elsevier BV

Subject

Biophysics

Reference43 articles.

1. A fully automatic method yielding initial models from high-resolution cryo-electron microscopy maps;Terwilliger;Nat. Methods,2018

2. DeepTracer for fast de novo cryo-EM protein structure modeling and special studies on CoV-related complexes;Pfab;Proc. Natl. Acad. Sci. USA,2021

3. De novo main-chain modeling for EM maps using MAINMAST;Terashi;Nat. Commun.,2018

4. Real-space refinement with DireX: from global fitting to side-chain improvements;Wang;Biopolymers,2012

5. Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics;Trabuco;Structure,2008

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