GROmaρs: A GROMACS-Based Toolset to Analyze Density Maps Derived from Molecular Dynamics Simulations-Reference-Cited by-同舟云学术

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GROmaρs: A GROMACS-Based Toolset to Analyze Density Maps Derived from Molecular Dynamics Simulations

Published:2019-01 Issue:1 Volume:116 Page:4-11
ISSN:0006-3495
Container-title:Biophysical Journal
language:en
Short-container-title:Biophysical Journal

Author:

Briones Rodolfo,Blau Christian,Kutzner Carsten,de Groot Bert L.,Aponte-Santamaría Camilo

Funder

Centre of Excellence for Computational Biomolecular Research, BioExcel CoE

European Union

Publisher

Elsevier BV

Subject

Biophysics

Reference39 articles.

1. Biomolecular simulation: a computational microscope for molecular biology;Dror;Annu. Rev. Biophys,2012

2. VMD: visual molecular dynamics;Humphrey;J. Mol. Graph,1996

3. 2015. The PyMOL Molecular Graphics System, Version 1.8: Schrödinger, LLC.

4. UCSF Chimera—a visualization system for exploratory research and analysis;Pettersen;J. Comput. Chem,2004

5. GROMACS: high performance molecular simulations through multi-level parallelism from laptops to supercomputers;Abraham;SoftwareX,2015

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