Protocol for using Ciclops to build models trained on cross-platform transcriptome data for clinical outcome prediction

Author:

Chou Elysia,Zhang Hanrui,Guan Yuanfang

Funder

National Science Foundation

National Institutes of Health

Directorate for Geosciences

Publisher

Elsevier BV

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Neuroscience

Reference16 articles.

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3. Consistency of predictive signature genes and classifiers generated using different microarray platforms;Fan;Pharmacogenomics J.,2010

4. Identification of transcriptional subtypes in lung adenocarcinoma and squamous cell carcinoma through integrative analysis of microarray and RNA sequencing data;Fauteux;Sci. Rep.,2021

5. Rat toxicogenomic study reveals analytical consistency across microarray platforms;Guo;Nat. Biotechnol.,2006

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