CRIC-seq protocol for in situ profiling of proximal RNA-RNA contacts associated with RNA-binding proteins-Reference-Cited by-同舟云学术

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CRIC-seq protocol for in situ profiling of proximal RNA-RNA contacts associated with RNA-binding proteins

Published:2023-09 Issue:3 Volume:4 Page:102401
ISSN:2666-1667
Container-title:STAR Protocols
language:en
Short-container-title:STAR Protocols

Author:

Ye Rong,Hu Naijing,Xue Yuanchao^ORCID

Funder

National Natural Science Foundation of China

Chinese Academy of Sciences

National Key Research and Development Program of China

K. C. Wong Education Foundation

Publisher

Elsevier BV

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Neuroscience

Reference15 articles.

1. Capture RIC-seq reveals positional rules of PTBP1-associated RNA loops in splicing regulation;Ye;Mol. Cell,2023

2. RIC-seq for global in situ profiling of RNA-RNA spatial interactions;Cai;Nature,2020

3. Mutation of PTB binding sites causes misregulation of alternative 3' splice site selection in vivo;Pérez;RNA,1997

4. Polypyrimidine tract binding protein antagonizes exon definition;Wagner;Mol. Cell Biol.,2001

5. Genome-wide analysis of PTB-RNA interactions reveals a strategy used by the general splicing repressor to modulate exon inclusion or skipping;Xue;Mol. Cell,2009

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