GPApred: The first computational predictor for identifying proteins with LPXTG-like motif using sequence-based optimal features

Author:

Malik Adeel,Shoombuatong Watshara,Kim Chang-Bae,Manavalan Balachandran

Funder

Ministry of Science, ICT and Future Planning

National Research Foundation of Korea

Publisher

Elsevier BV

Subject

Molecular Biology,General Medicine,Biochemistry,Structural Biology

Reference61 articles.

1. CW-PRED: a HMM-based method for the classification of cell wall-anchored proteins of gram-positive bacteria;Fimereli,2012

2. Characterization of a unique glycosylated anchor endopeptidase that cleaves the LPXTG sequence motif of cell surface proteins of Gram-positive bacteria;Lee;J. Biol. Chem.,2002

3. YSIRK-G/S-directed translocation is required for Streptococcus suis to deliver diverse cell wall anchoring effectors contributing to bacterial pathogenicity;Bai;Virulence,2020

4. Transcriptome analysis unveils survival strategies of Streptococcus parauberis against fish serum;Lee;PLoS One,2021

5. Evaluation of probiotic characteristics and whole genome analysis of Pediococcus pentosaceus MR001 for use as probiotic bacteria in shrimp aquaculture;Wanna;Sci. Rep.,2021

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