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A BERT-based model for the prediction of lncRNA subcellular localization in Homo sapiens

  • Published:2024-04 Issue: Volume:265 Page:130659
  • ISSN:0141-8130
  • Container-title:International Journal of Biological Macromolecules
  • language:en
  • Short-container-title:International Journal of Biological Macromolecules

Author:

Zhang Zhao-Yue,Zhang Zheng,Ye Xiucai,Sakurai Tetsuya,Lin Hao

Funder

Japan Science and Technology Agency

National Natural Science Foundation of China

Japan Society for the Promotion of Science

Publisher

Elsevier BV

Reference53 articles.

1. Beyond the RNA-dependent function of LncRNA genes;Ali;Elife,2020

2. DeepBIO: an automated and interpretable deep-learning platform for high-throughput biological sequence prediction, functional annotation and visualization analysis;Wang;Nucleic Acids Res.,2023

3. Non-coding transcription instructs chromatin folding and compartmentalization to dictate enhancer-promoter communication and T cell fate;Isoda;Cell,2017

4. LAST, a c-Myc-inducible long noncoding RNA, cooperates with CNBP to promote CCND1 mRNA stability in human cells;Cao;Elife,2017

5. Global positioning system: understanding long noncoding RNAs through subcellular localization;Carlevaro-Fita;Mol. Cell,2019

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