HMMpTM: Improving transmembrane protein topology prediction using phosphorylation and glycosylation site prediction-Reference-Cited by-同舟云学术

HMMpTM: Improving transmembrane protein topology prediction using phosphorylation and glycosylation site prediction

Published:2014-02 Issue:2 Volume:1844 Page:316-322
ISSN:1570-9639
Container-title:Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics
language:en
Short-container-title:Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Author:

Tsaousis Georgios N.,Bagos Pantelis G.,Hamodrakas Stavros J.

Funder

European Union (European Social Fund — ESF)

Greek national funds

Operational Program “Education and Lifelong Learning” of the National Strategic Reference Framework (NSRF) — Research Funding Program ‘Heracleitus II: Investing in knowledge society’

European Social Fund

Publisher

Elsevier BV

Subject

Molecular Biology,Biochemistry,Biophysics,Analytical Chemistry

Reference74 articles.

1. Predicting transmembrane protein topology with a Hidden Markov Model: application to complete genomes;Krogh;J. Mol. Biol.,2001

2. The protein data bank;Berman;Nucleic Acids Res.,2000

3. Membrane protein prediction methods;Punta;Methods,2007

4. A simple method for displaying the hydropathic character of a protein;Kyte;J. Mol. Biol.,1982

5. TopPred II: an improved software for membrane protein structure predictions;Claros;Comput. Appl. Biosci.,1994

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