Gene tree correction for reconciliation and species tree inference: Complexity and algorithms

Author:

Dondi Riccardo,El-Mabrouk Nadia,Swenson Krister M.

Publisher

Elsevier BV

Subject

Computational Theory and Mathematics,Discrete Mathematics and Combinatorics,Theoretical Computer Science

Reference38 articles.

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2. Inferring a tree from lowest common ancestors with an application to the optimization of relational expressions;Aho;SIAM Journal on Computing,1981

3. Simultaneous bayesian gene tree reconstruction and reconciliation analysis;Akerborg;Proceedings of the National Academy of Sciences of the United States of America,2009

4. Some APX-completeness results for cubic graphs;Alimonti;Theoretical Computer Science,2000

5. Gene tree reconstruction and orthology analysis based on an integrated model for duplications and sequence evolution;Arvestad,2004

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1. MUL-tree pruning for consistency and optimal reconciliation - complexity and algorithms;Theoretical Computer Science;2022-11

2. Complexity and Algorithms for MUL-Tree Pruning;Lecture Notes in Computer Science;2021

3. Alignment distance of regular tree languages;Theoretical Computer Science;2019-10

4. Reconciling event-labeled gene trees with MUL-trees and species networks;Journal of Mathematical Biology;2019-08-13

5. Credibility of Evolutionary Events in Gene Trees;IEEE/ACM Transactions on Computational Biology and Bioinformatics;2019-05-01

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