Locus-specific DNA methylation analysis of retrotransposons in ES, somatic and cancer cells using High-Throughput Targeted Repeat Element Bisulfite Sequencing-Reference-Cited by-同舟云学术

Locus-specific DNA methylation analysis of retrotransposons in ES, somatic and cancer cells using High-Throughput Targeted Repeat Element Bisulfite Sequencing

Published:2015-03 Issue: Volume:3 Page:87-89
ISSN:2213-5960
Container-title:Genomics Data
language:en
Short-container-title:Genomics Data

Author:

Bakshi Arundhati,Ekram Muhammad B.,Kim Joomyeong

Funder

National Institute of Health

Publisher

Elsevier BV

Subject

Genetics,Molecular Medicine,Biochemistry,Biotechnology

Reference4 articles.

1. High-Throughput Targeted Repeat Element Bisulfite Sequencing (HT-TREBS): Genome-wide DNA methylation analysis of IAP LTR retrotransposon;Ekram;PLoS One,2014

2. Retrotransposon-based profiling of mammalian epigenomes: DNA methylation of IAP LTRs in embryonic stem, somatic and cancer cells;Bakshi;Genomics,2014

3. Fast gapped-read alignment with Bowtie 2;Langmead;Nat. Methods,2012

4. BiQ Analyzer HT: locus-specific analysis of DNA methylation by high-throughput bisulfite sequencing;Lutsik;Nucleic Acids Res.,2011

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