emDNA – A Tool for Modeling Protein-decorated DNA Loops and Minicircles at the Base-pair Step Level-Reference-Cited by-同舟云学术

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emDNA – A Tool for Modeling Protein-decorated DNA Loops and Minicircles at the Base-pair Step Level

Published:2022-06 Issue:11 Volume:434 Page:167558
ISSN:0022-2836
Container-title:Journal of Molecular Biology
language:en
Short-container-title:Journal of Molecular Biology

Author:

Young Robert T.,Clauvelin Nicolas,Olson Wilma K.

Funder

U.S. Public Health Service

McGill University

National Institutes of Health

Rutgers, The State University of New Jersey

Publisher

Elsevier BV

Subject

Molecular Biology,Structural Biology

Reference44 articles.

1. Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn;Rice;Cell,1996

2. Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 Å resolution;Davey;J. Mol. Biol.,2002

3. Bridging the resolution gap in structural modeling of 3D genome organization;Marti-Renom;PLoS Comput. Biol.,2011

4. Contributions of sequence to the higher-order structures of DNA;Todolli;Biophys. J.,2017

5. The Protein Data Bank;Berman;Nucleic Acids Res.,2000

Cited by 2 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Computational Resources for Molecular Biology 2022;Journal of Molecular Biology;2022-06

2. Revisiting DNA Sequence-Dependent Deformability in High-Resolution Structures: Effects of Flanking Base Pairs on Dinucleotide Morphology and Global Chain Configuration;Life;2022-05-20

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