PhyreRisk: A Dynamic Web Application to Bridge Genomics, Proteomics and 3D Structural Data to Guide Interpretation of Human Genetic Variants-Reference-Cited by-同舟云学术

PhyreRisk: A Dynamic Web Application to Bridge Genomics, Proteomics and 3D Structural Data to Guide Interpretation of Human Genetic Variants

Published:2019-06 Issue:13 Volume:431 Page:2460-2466
ISSN:0022-2836
Container-title:Journal of Molecular Biology
language:en
Short-container-title:Journal of Molecular Biology

Author:

Ofoegbu Tochukwu C.,David Alessia,Kelley Lawrence A.,Mezulis Stefans,Islam Suhail A.,Mersmann Sophia F.,Strömich Léonie,Vakser Ilya A.,Houlston Richard S.,Sternberg Michael J.E.

Funder

Wellcome Trust

Wellcome Trust PhD studentship

BBSRC

NSF

NIH

Publisher

Elsevier BV

Subject

Molecular Biology,Structural Biology

Reference28 articles.

1. Mapping genetic variations to three-dimensional protein structures to enhance variant interpretation: a proposed framework;Glusman;Genome Med.,2017

2. RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy;Burley;Nucleic Acids Res.,2019

3. Serverification of molecular modeling applications: the Rosetta Online Server that Includes Everyone (ROSIE);Lyskov;PLoS One,2013

4. The I-TASSER Suite: protein structure and function prediction;Yang;Nat. Methods,2015

5. The Phyre2 web portal for protein modeling, prediction and analysis;Kelley;Nat. Protoc.,2015

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