Triplex intermediates in folding of human telomeric quadruplexes probed by microsecond-scale molecular dynamics simulations-Reference-Cited by-同舟云学术

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Triplex intermediates in folding of human telomeric quadruplexes probed by microsecond-scale molecular dynamics simulations

Published:2014-10 Issue: Volume:105 Page:22-35
ISSN:0300-9084
Container-title:Biochimie
language:en
Short-container-title:Biochimie

Author:

Stadlbauer Petr,Trantírek Lukáš,Cheatham Thomas E.,Koča Jaroslav,Šponer Jiří

Funder

Czech Science Foundation

CEITEC - Central European Institute of Technology

National Institutes of Health

Publisher

Elsevier BV

Subject

General Medicine,Biochemistry

Reference97 articles.

1. Human telomeric G-quadruplex: structures of DNA and RNA sequences;Phan;Febs J.,2010

2. G-quadruplex structures are stable and detectable in human genomic DNA;Lam;Nat. Commun.,2013

3. Quantitative visualization of DNA G-quadruplex structures in human cells;Biffi;Nat. Chem.,2013

4. Evaluation of parameters critical for observing nucleic acids inside living Xenopus laevis oocytes by in-cell NMR spectroscopy;Haensel;J. Am. Chem. Soc.,2009

5. G-quadruplex structures: in vivo evidence and function;Lipps;Trends Cell. Biol.,2009

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1. Molecular dynamics simulations reveal the parallel stranded d(GGGA)3GGG DNA quadruplex folds via multiple paths from a coil-like ensemble;International Journal of Biological Macromolecules;2024-03

2. A General Framework to Interpret Hydrogen–Deuterium Exchange Native Mass Spectrometry of G-Quadruplex DNA;Journal of the American Chemical Society;2023-12-04

3. Computational Probing of the Folding Mechanism of Human Telomeric G-Quadruplex DNA;Journal of Chemical Information and Modeling;2023-10-02

4. Parallel G-quadruplex folds via multiple paths involving G-tract stacking and structuring from coil ensemble;2023-09-09

5. A General Framework to Interpret Hydrogen-Deuterium Exchange Native Mass Spectrometry of G-Quadruplex DNA;2023-08-25

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