Deep learning embedder method and tool for mass spectra similarity search-Reference-Cited by-同舟云学术

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Deep learning embedder method and tool for mass spectra similarity search

Published:2021-02 Issue: Volume:232 Page:104070
ISSN:1874-3919
Container-title:Journal of Proteomics
language:en
Short-container-title:Journal of Proteomics

Author:

Qin Chunyuan,Luo Xiyang,Deng Chuan,Shu Kunxian,Zhu Weimin,Griss Johannes,Hermjakob Henning,Bai Mingze,Perez-Riverol Yasset

Funder

Natural Science Foundation of Chongqing

State Key Laboratory of Proteomics

National Key Research and Development Program of China

Wellcome

Publisher

Elsevier BV

Subject

Biochemistry,Biophysics

Reference40 articles.

1. Mass-spectrometric exploration of proteome structure and function;Aebersold;Nature,2016

2. Application of targeted mass spectrometry in bottom-up proteomics for systems biology research;Manes;J. Proteome,2018

3. Methods to calculate spectrum similarity;Yilmaz,2017

4. Probability-based protein identification by searching sequence databases using mass spectrometry data;Perkins;Electrophoresis,1999

5. MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification;Cox;Nat. Biotechnol.,2008

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