Comprehensive and sensitive proteogenomics data analysis strategy based on complementary multi-stage database search-Reference-Cited by-同舟云学术

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Comprehensive and sensitive proteogenomics data analysis strategy based on complementary multi-stage database search

Published:2018-04 Issue: Volume:427 Page:11-19
ISSN:1387-3806
Container-title:International Journal of Mass Spectrometry
language:en
Short-container-title:International Journal of Mass Spectrometry

Author:

Madar Inamul Hasan,Lee Wonyeop,Wang Xiaojing,Ko Seung-Ik,Kim Hokeun,Mun Dong-Gi,Zhang Bing,Paek Eunok,Lee Sang-Won

Funder

Collaborative Genome Program for Fostering New Post-Genome Industry

Korean Ministry of Science and ICT

National Cancer Institute

Cancer Prevention & Research Institutes of Texas

Publisher

Elsevier BV

Subject

Physical and Theoretical Chemistry,Spectroscopy,Condensed Matter Physics,Instrumentation

Reference55 articles.

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2. The model organism as a system: integrating ‘omics’ data sets;Joyce;Nat. Rev. Mol. Cell Biol.,2006

3. An introduction to functional genomics and systems biology;Bunnik;Adv. Wound Care,2013

4. From ‘omics’ to complex disease: a systems biology approach to gene-environment interactions in cancer;Knox;Cancer Cell Int.,2010

5. Highly multiplexed proteomic platform for biomarker discovery, diagnostics, and therapeutics;Mehan;Adv. Exp. Med. Biol.,2013

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1. Integrated pharmaco-proteogenomics defines two subgroups in isocitrate dehydrogenase wild-type glioblastoma with prognostic and therapeutic opportunities;Nature Communications;2020-07-03

2. MutCombinator: identification of mutated peptides allowing combinatorial mutations using nucleotide-based graph search;Bioinformatics;2020-07-01

3. Proteogenomic Approach to UTR Peptide Identification;Journal of Proteome Research;2019-11-12

4. Accurate Precursor Mass Assignment Improves Peptide Identification in Data-Independent Acquisition Mass Spectrometry;Analytical Chemistry;2019-06-03

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