Scikit-ribo Enables Accurate Estimation and Robust Modeling of Translation Dynamics at Codon Resolution-Reference-Cited by-同舟云学术

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Scikit-ribo Enables Accurate Estimation and Robust Modeling of Translation Dynamics at Codon Resolution

Published:2018-02 Issue:2 Volume:6 Page:180-191.e4
ISSN:2405-4712
Container-title:Cell Systems
language:en
Short-container-title:Cell Systems

Author:

Fang Han,Huang Yi-Fei,Radhakrishnan Aditya,Siepel Adam,Lyon Gholson J.,Schatz Michael C.

Funder

US NIH

US National Science Foundation

Cold Spring Harbor Laboratory (CSHL) Cancer Center

NIH

Publisher

Elsevier BV

Subject

Cell Biology,Histology,Pathology and Forensic Medicine

Reference91 articles.

1. Genetic influences on translation in yeast;Albert;PLoS Genet.,2014

2. Dynamics of ribosome scanning and recycling revealed by translation complex profiling;Archer;Nature,2016

3. Glmnet in Python;Balakumar;Zenodo,2017

4. Ribosome profiling reveals the what, when, where and how of protein synthesis;Brar;Nat. Rev. Mol. Cell Biol.,2015

5. Near-optimal probabilistic RNA-seq quantification;Bray;Nat. Biotechnol.,2016

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