nucleAIzer: A Parameter-free Deep Learning Framework for Nucleus Segmentation Using Image Style Transfer

Author:

Hollandi Reka,Szkalisity Abel,Toth Timea,Tasnadi Ervin,Molnar Csaba,Mathe Botond,Grexa Istvan,Molnar Jozsef,Balind Arpad,Gorbe Mate,Kovacs Maria,Migh Ede,Goodman Allen,Balassa Tamas,Koos Krisztian,Wang Wenyu,Caicedo Juan Carlos,Bara Norbert,Kovacs Ferenc,Paavolainen Lassi,Danka Tivadar,Kriston Andras,Carpenter Anne Elizabeth,Smith Kevin,Horvath Peter

Funder

LENDULET-BIOMAG

European Regional Development Funds

Academy of Finland

National Institutes of Health

Swedish Research Council

Publisher

Elsevier BV

Subject

Cell Biology,Histology,Pathology and Forensic Medicine

Reference24 articles.

1. SegNet: a deep convolutional encoder-decoder architecture for image segmentation;Badrinarayanan;IEEE Trans. Pattern Anal. Mach. Intell.,2017

2. Nucleus segmentation across imaging experiments: the 2018 Data Science Bowl;Caicedo;Nat. Methods.,2019

3. Evaluation of deep learning strategies for nucleus sgmentation in fluorescence images;Caicedo;Cytometry A,2019

4. CellProfiler: image analysis software for identifying and quantifying cell phenotypes;Carpenter;Genome Biol,2006

5. A deep learning algorithm for one-step contour aware nuclei segmentation of histopathological images;Cui;arXiv,2018

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