Assessing host-specificity of Escherichia coli using a supervised learning logic-regression-based analysis of single nucleotide polymorphisms in intergenic regions-Reference-Cited by-同舟云学术

Assessing host-specificity of Escherichia coli using a supervised learning logic-regression-based analysis of single nucleotide polymorphisms in intergenic regions

Published:2015-11 Issue: Volume:92 Page:72-81
ISSN:1055-7903
Container-title:Molecular Phylogenetics and Evolution
language:en
Short-container-title:Molecular Phylogenetics and Evolution

Author:

Zhi Shuai,Li Qiaozhi,Yasui Yutaka,Edge Thomas,Topp Edward,Neumann Norman F.

Funder

Alberta Innovates – Energy and Environment Solutions

Canadian Foundation for Innovation

Natural Sciences and Engineering Research Council

Publisher

Elsevier BV

Subject

Genetics,Molecular Biology,Ecology, Evolution, Behavior and Systematics

Reference48 articles.

1. Escherichia coli phylogenetic group determination and its application in the identification of the major animal source of fecal contamination;Carlos;BMC Microbiol.,2010

2. Identification of fecal Escherichia coli from humans and animals by ribotyping;Carson;Appl. Environ. Microbiol.,2001

3. Comparison of ribotyping and repetitive extragenic palindromic-PCR for identification of fecal Escherichia coli from humans and animals;Carson;Appl. Environ. Microbiol.,2003

4. Genetic diversity and temporal variation in the E. coli population of a human host;Caugant;Genetics,1981

5. Evidence for a human-specific Escherichia coli clone;Clermont;Environ. Microbiol.,2008

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