KINN: An alignment-free accurate phylogeny reconstruction method based on inner distance distributions of k-mer pairs in biological sequences
Author:
Publisher
Elsevier BV
Subject
Genetics,Molecular Biology,Ecology, Evolution, Behavior and Systematics
Reference48 articles.
1. ADACT: a tool for analysing (dis)similarity among nucleotide and protein sequences using minimal and relative absent words;Akon;Bioinformatics,2021
2. Phylogenies from unaligned proteomes using sequence environments of amino acid residues;Aledo;Scientific Reports,2022
3. Phylogenetic analyses of some extremely halophilic archaea isolated from Dead Sea water, determined on the basis of their 16S rRNA sequences;Arahal;Appl. Environ. Microbiol.,1996
4. Insertions and deletions as phylogenetic signal in alignment-free sequence comparison;Birth;PLoS Comput. Biol.,2022
5. Phylogeny reconstruction with alignment-free method that corrects for horizontal gene transfer;Bromberg;PLoS Comput. Biol.,2016
Cited by 7 articles. 订阅此论文施引文献 订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献
1. OrthoPhyl—streamlining large-scale, orthology-based phylogenomic studies of bacteria at broad evolutionary scales;G3: Genes, Genomes, Genetics;2024-06-05
2. Predicting viral host codon fitness and path shifting through tree-based learning on codon usage biases and genomic characteristics;2024-05-23
3. CGRWDL: alignment-free phylogeny reconstruction method for viruses based on chaos game representation weighted by dynamical language model;Frontiers in Microbiology;2024-03-20
4. A new perspective on codon usage, selective pressure, and phylogenetic implications of the plastomes in the Telephium clade (Crassulaceae);Gene;2024-01
5. Phylogeny Reconstruction Using $$k-mer$$ Derived Transition Features;Lecture Notes in Networks and Systems;2024
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3