Mitochondrial recovery from shotgun metagenome sequencing enabling phylogenetic analysis of the common thresher shark (Alopias vulpinus)-Reference-Cited by-同舟云学术

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Mitochondrial recovery from shotgun metagenome sequencing enabling phylogenetic analysis of the common thresher shark (Alopias vulpinus)

Published:2018-02 Issue: Volume:15 Page:10-15
ISSN:2214-5400
Container-title:Meta Gene
language:en
Short-container-title:Meta Gene

Author:

Doane Michael P.,Kacev Dovi,Harrington Sean,Levi Kyle,Pande Dnyanada,Vega Alejandro,Dinsdale Elizabeth A.

Funder

Division of Molecular and Cellular Biosciences

National Science Foundation

Publisher

Elsevier BV

Subject

Genetics (clinical),Genetics

Reference52 articles.

1. The complete mitochondrial genome sequence of the world's largest fish, the whale shark (Rhincodon typus), and its comparison with those of related shark species;Alam;Gene,2014

2. Basic local alignment search tool;Altschup;J. Mol. Biol.,1990

3. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing;Bankevich;J. Comput. Biol.,2012

4. MITOS: improved de novo metazoan mitochondrial genome annotation;Bernt;Mol. Phylogenet. Evol.,2013

5. The complete mitochondrial genome of the sandbar shark Carcharhinus plumbeus;Blower;Mitochondrial DNA,2016

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