Accelerating DNA pairwise sequence alignment using FPGA and a customized convolutional neural network

Author:

Rashed Amr Ezz El-Din,Obaya Marwa,Moustafa Hossam El~Din

Publisher

Elsevier BV

Subject

Electrical and Electronic Engineering,General Computer Science,Control and Systems Engineering

Reference29 articles.

1. Strengholt, B; Brobbel, M. Acceleration of the Smith-Waterman algorithm for DNA sequence alignment using an FPGA platform. 2013.

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3. A parallel smith-waterman algorithm based on divide and conquer;Zhang,2002

4. Implementation of the Smith-Waterman algorithm on a reconfigurable supercomputing platform;Zhang,2007

5. Accelerating Next Generation Genome Reassembly in FPGAs;Kim,2011

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