In silico analysis of heparin and chondroitin sulfate binding mechanisms of the antiprotozoal drug berenil and pentamidine-Reference-Cited by-同舟云学术

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In silico analysis of heparin and chondroitin sulfate binding mechanisms of the antiprotozoal drug berenil and pentamidine

Published:2019-08 Issue: Volume:482 Page:107742
ISSN:0008-6215
Container-title:Carbohydrate Research
language:en
Short-container-title:Carbohydrate Research

Author:

Samsonov Sergey A.,Freza Sylwia,Zsila Ferenc

Funder

National Science Center of Poland

Marie Skłodowska-Curie

National Competitiveness and Excellence Program

Wroclaw Centre for Networking and Supercomputing

Publisher

Elsevier BV

Subject

Organic Chemistry,Biochemistry,General Medicine,Analytical Chemistry

Reference54 articles.

1. Essentials of Glycobiology;Varki,2009

2. So you think computational approaches to understanding glycosaminoglycan–protein interactions are too dry and too rigid? Think again!

3. Multiscale modeling of glycosaminoglycan structure and dynamics: current methods and challenges

4. Specificities of heparan sulphate proteoglycans in developmental processes

5. Characterization of the interaction of interleukin-8 with hyaluronan, chondroitin sulfate, dermatan sulfate and their sulfated derivatives by spectroscopy and molecular modeling

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1. Spermine and spermidine SI-PPCs: Molecular dynamics reveals enhanced biomolecular interactions;International Journal of Biological Macromolecules;2024-10

2. Molecular Dynamics Simulation-Based Prediction of Glycosaminoglycan Interactions with Drug Molecules;Methods in Molecular Biology;2023-09-08

3. Molecular Dynamics Approaches Dissect Molecular Mechanisms Underlying Methylene Blue–Glycosaminoglycan Interactions;Molecules;2022-04-20

4. Computational insights into heparin-small molecule interactions: Evaluation of the balance between stacking and non-stacking binding modes;Carbohydrate Research;2021-09

5. Mind Your Dye: The Amyloid Sensor Thioflavin T Interacts with Sulfated Glycosaminoglycans Used To Induce Cross-β-Sheet Motifs;The Journal of Physical Chemistry B;2020-12-11

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