Delta.EPI: a probabilistic voting-based enhancer–promoter interaction prediction platform-Reference-Cited by-同舟云学术

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Delta.EPI: a probabilistic voting-based enhancer–promoter interaction prediction platform

Published:2023-07 Issue:7 Volume:50 Page:519-527
ISSN:1673-8527
Container-title:Journal of Genetics and Genomics
language:en
Short-container-title:Journal of Genetics and Genomics

Author:

Zhang Yuyang^ORCID,Wang Haoyu,Liu Jing,Li Junlin^ORCID,Zhang Qing^ORCID,Tang Bixia^ORCID,Zhang Zhihua^ORCID

Funder

National Natural Science Foundation of China

Ministry of Science and Technology of the People's Republic of China

Natural Science Foundation of Beijing Municipality

National Key Research and Development Program of China

Publisher

Elsevier BV

Subject

Genetics,Molecular Biology

Reference60 articles.

1. FANTOM enters 20th year: expansion of transcriptomic atlases and functional annotation of non-coding RNAs;Abugessaisa;Nucleic Acids Res.,2021

2. FastQC. A quality control tool for high throughput sequence data;Andrews,2010

3. Statistical confidence estimation for Hi-C data reveals regulatory chromatin contacts;Ay;Genome Res.,2014

4. CHiCAGO: robust detection of DNA looping interactions in Capture Hi-C data;Cairns;Genome Biol.,2016

5. HIFI: estimating DNA-DNA interaction frequency from Hi-C data at restriction-fragment resolution;Cameron;Genome Biol.,2020

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