High Sensitivity of Shotgun Metagenomic Sequencing in Colon Tissue Biopsy by Host DNA Depletion-Reference-Cited by-同舟云学术

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High Sensitivity of Shotgun Metagenomic Sequencing in Colon Tissue Biopsy by Host DNA Depletion

Published:2022-09 Issue: Volume: Page:
ISSN:1672-0229
Container-title:Genomics, Proteomics & Bioinformatics
language:en
Short-container-title:Genomics, Proteomics & Bioinformatics

Author:

Cheng Wing Yin,Liu Wei-Xin,Ding Yanqiang,Wang Guoping,Shi Yu,Chu Eagle S.H.,Wong Sunny,Sung Joseph J.Y.,Yu Jun

Publisher

Elsevier BV

Subject

Computational Mathematics,Genetics,Molecular Biology,Biochemistry

Reference29 articles.

1. Structure, function and diversity of the healthy human microbiome;Human Microbiome Project Consortium;Nature,2012

2. Strain-level metagenomic assignment and compositional estimation for long reads with MetaMaps;Dilthey;Nat Commun,2019

3. Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome;Goltsman;Genome Res,2018

4. Microbial strain-level population structure and genetic diversity from metagenomes;Truong;Genome Res,2017

5. Integrative microbiomics in bronchiectasis exacerbations;Mac Aogain;Nat Med,2021

Cited by 3 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Microbial-enrichment method enables high-throughput metagenomic characterization from host-rich samples;Nature Methods;2023-10-12

2. EVALUATION OF A METAGENOMIC NEXT-GENERATION SEQUENCING ASSAY WITH A NOVEL HOST DEPLETION METHOD FOR PATHOGEN IDENTIFICATION IN SEPTIC PATIENTS;2023-03-29

3. The Blood Microbiome and Health: Current Evidence, Controversies, and Challenges;International Journal of Molecular Sciences;2023-03-15

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