A chromosome-level genome assembly of the red drum, Sciaenops ocellatus-Reference-Cited by-同舟云学术

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A chromosome-level genome assembly of the red drum, Sciaenops ocellatus

Published:2021-03 Issue:2 Volume:6 Page:178-185
ISSN:2468-550X
Container-title:Aquaculture and Fisheries
language:en
Short-container-title:Aquaculture and Fisheries

Author:

Xu Tianjun,Li Ye,Chu Qing,Zheng Weiwei

Funder

National Key Research and Development Program of China

Publisher

Elsevier BV

Subject

Ecology,Aquatic Science,Ecology, Evolution, Behavior and Systematics

Reference48 articles.

1. The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000;Bairoch;Nucleic Acids Research,2000

2. Hi-C: A comprehensive technique to capture the conformation of genomes;Belton;Methods,2012

3. Tandem repeats finder: A program to analyze DNA sequences;Benson;Nucleic Acids Research,1999

4. Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions;Burton;Nature Biotechnology,2013

5. SOAPnuke: A MapReduce acceleration-supported software for integrated quality control and preprocessing of high-throughput sequencing data;Chen;GigaScience,2018

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2. The novel fish miRNA, Soc-miR-118, functions as a negative regulator in NF-κB–mediated inflammation by targeting IL-6 in teleost fish;International Journal of Biological Macromolecules;2024-06

3. Enhancement of Nutrient Composition and Non-Volatile Flavor Substances in Muscle Tissue of Red Drum (Sciaenops ocellatus) Through Inland Low Salinity Saline-Alkaline Water Culture;Journal of Agricultural and Food Chemistry;2024-03-20

4. Tissue damage, antioxidant capacity, transcriptional and metabolic regulation of red drum Sciaenops ocellatus in response to nanoplastics exposure and subsequent recovery;Ecotoxicology and Environmental Safety;2024-03

5. Comparative transcriptome analysis reveals potential regulatory mechanisms of genes and immune pathways following Vibrio harveyi infection in red drum (Sciaenops ocellatus);Fish & Shellfish Immunology;2024-03

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