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To pool or not to pool? Impact of the use of individual and pooled fecal samples for in vitro fermentation studies

  • Published:2014-12 Issue: Volume:107 Page:1-7
  • ISSN:0167-7012
  • Container-title:Journal of Microbiological Methods
  • language:en
  • Short-container-title:Journal of Microbiological Methods

Author:

Aguirre Marisol,Ramiro-Garcia Javier,Koenen Marjorie E.,Venema Koen

Funder

Top Institute Food & Nutrition

Publisher

Elsevier BV

Subject

Microbiology (medical),Molecular Biology,Microbiology

Reference31 articles.

1. QIIME allows analysis of high-throughput community sequencing data;Caporaso;Nat. Methods,2010

2. Profiling Human Gut Bacterial Metabolism and Its Kinetics Using [U-13C] Glucose and NMR. NMR in Biomedicine;De Graaf,2010

3. UCHIME improves sensitivity and speed of chimera detection;Edgar;Bioinformatics,2011

4. Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data;Hamady;ISME J.,2010

5. Ironing out the wrinkles in the rare biosphere through improved OTU clustering;Huse;Environ. Microbiol.,2010
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