HiC-ACT: improved detection of chromatin interactions from Hi-C data via aggregated Cauchy test-Reference-Cited by-同舟云学术

HiC-ACT: improved detection of chromatin interactions from Hi-C data via aggregated Cauchy test

Published:2021-02 Issue:2 Volume:108 Page:257-268
ISSN:0002-9297
Container-title:The American Journal of Human Genetics
language:en
Short-container-title:The American Journal of Human Genetics

Author:

Lagler Taylor M.,Abnousi Armen,Hu Ming,Yang Yuchen,Li Yun

Funder

National Science Foundation

National Institutes of Health

Publisher

Elsevier BV

Subject

Genetics (clinical),Genetics

Reference30 articles.

1. Gene regulation in the 3D genome;Li;Hum. Mol. Genet.,2018

2. The Three-Dimensional Organization of Mammalian Genomes;Yu;Annu. Rev. Cell Dev. Biol.,2017

3. Long-range enhancer-promoter contacts in gene expression control;Schoenfelder;Nat. Rev. Genet.,2019

4. Systematic mapping of functional enhancer-promoter connections with CRISPR interference;Fulco;Science,2016

5. Using three-dimensional regulatory chromatin interactions from adult and fetal cortex to interpret genetic results for psychiatric disorders and cognitive traits;Giusti-Rodriguez;bioRxiv,2018

Cited by 18 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. SnapHiC-G: identifying long-range enhancer–promoter interactions from single-cell Hi-C data via a global background model;Briefings in Bioinformatics;2024-07-25

2. Comparative study on chromatin loop callers using Hi-C data reveals their effectiveness;BMC Bioinformatics;2024-03-21

3. Comparative study on chromatin loop callers using Hi-C data reveals their effectiveness;2023-11-25

4. Efficient Hi-C inversion facilitates chromatin folding mechanism discovery and structure prediction;Biophysical Journal;2023-09

5. The shape of chromatin: insights from computational recognition of geometric patterns in Hi-C data;Briefings in Bioinformatics;2023-08-28