ScGSLC: An unsupervised graph similarity learning framework for single-cell RNA-seq data clustering-Reference-Cited by-同舟云学术

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ScGSLC: An unsupervised graph similarity learning framework for single-cell RNA-seq data clustering

Published:2021-02 Issue: Volume:90 Page:107415
ISSN:1476-9271
Container-title:Computational Biology and Chemistry
language:en
Short-container-title:Computational Biology and Chemistry

Author:

Li Junyi,Jiang Wei,Han Henry,Liu Jing,Liu Bo,Wang Yadong

Funder

National Key Research and Development Program of China

Natural Science Foundation of Qinghai

National Natural Science Foundation of China

Science, Technology and Innovation Commission of Shenzhen Municipality

Publisher

Elsevier BV

Subject

Computational Mathematics,Organic Chemistry,Biochemistry,Structural Biology

Reference45 articles.

1. Scenic: single-cell regulatory network inference and clustering;Aibar;Nat. Methods,2017

2. A web server for comparative analysis of single-cell rna-seq data;Alavi;Nat. Commun.,2018

3. A comprehensive survey of graph embedding: problems, techniques, and applications;Cai;IEEE Trans. Knowl. Data Eng.,2018

4. Enhancing single-cell cellular state inference by incorporating molecular network features;Dong;bioRxiv,2019

5. String v9. 1: protein–protein interaction networks, with increased coverage and integration;Franceschini;Nucleic Acids Res.,2012

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1. Spectral clustering based on multi-similarity learning method for single-cell RNA-seq data;2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM);2023-12-05

2. Deep learning exploration of single-cell and spatially resolved cancer transcriptomics to unravel tumour heterogeneity;Computers in Biology and Medicine;2023-09

3. Unsupervised Analysis of Optical Imaging Data for the Discovery of Reactivity Patterns in Metal Alloy;Small Methods;2023-06-29

4. ScCCL: Single-Cell Data Clustering Based on Self-Supervised Contrastive Learning;IEEE/ACM Transactions on Computational Biology and Bioinformatics;2023-05-01

5. Cell-Type-Specific Gene Regulatory Networks of Pro-Inflammatory and Pro-Resolving Lipid Mediator Biosynthesis in the Immune System;International Journal of Molecular Sciences;2023-02-22

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